The cancer cell mitochondrion could be a promising target for the development of new anticancer agents. 16-([3-chloro-5-(trifluoromethyl)-phenyl]carbamoylamino)hexadecanoic acid (2) is a novel aryl-urea fatty acid that targets the mitochondrion in MDA-MB-231 breast cancer cells and activates cell death. In the present study, the relationships between alkyl chain length in 2 analogues, mitochondrial disruption and cell killing were evaluated. The chain-contracted C13-analogue 7c optimally disrupted the mitochondrial membrane potential (IC50 4.8±0.8 µM). In addition, annexin V-FITC/7-AAD assays demonstrated that 7c was most effective cell killing analogue and C11 BODIPY (581/591) assays demonstrated that 7c was also most effective in generating reactive oxygen species in MDA-MB-231 cells. Together, carbon chain length is a key factor that determine the capacity of 2 analogues to disrupt the mitochondrial membrane, induce the production of reactive oxygen species and kill breast cancer cells. As an aryl-urea with enhanced activity and improved drug-like properties, 7c may be a suitable lead molecule for entry into a program of development of these molecules as anticancer agents.© 2024 Wiley‐VCH GmbH.